Academic Publishers Pay Lip Service to Peer Review Standards

October 18, 2013

Science magazine has published an important article about today’s open-access academic journals— Who’s Afraid of Peer Review?” I highly recommend reading the entire piece, but I’ll share some highlights here. Journalist John Bohannon begins:

“On 4 July, good news arrived in the inbox of Ocorrafoo Cobange, a biologist at the Wassee Institute of Medicine in Asmara. It was the official letter of acceptance for a paper he had submitted 2 months earlier to the Journal of Natural Pharmaceuticals, describing the anticancer properties of a chemical that Cobange had extracted from a lichen.

“In fact, it should have been promptly rejected. Any reviewer with more than a high-school knowledge of chemistry and the ability to understand a basic data plot should have spotted the paper’s short-comings immediately. Its experiments are so hopelessly flawed that the results are meaningless. I know because I wrote the paper.”

You see, Science performed an elaborate sting operation across the rapidly growing field of open-access journal publication. Most of these journals make money by charging authors upon acceptance of their articles; Bohannon began to suspect a number of these publications were motivated to accept papers that would not stand up to rigorous peer review, despite assertions on their websites to the contrary. What he found is truly disheartening.

See the article for the methodology behind the fake paper and Bohannon’s submissions procedure, both of which are informative in themselves. The results are disheartening. When the article went to press, far more journals (157) had accepted the bogus paper than rejected it (98). Even respected publishers like Elsevier and Sage were found to host at least one of these questionable journals. Most of the publishers that performed any review at all focused on mechanical issues like formatting, not substance. What is going on here? Bohannon offers:

“A striking picture emerges from the global distribution of open-access publishers, editors, and bank accounts. Most of the publishing operations cloak their true geographic location. They create journals with names like the American Journal of Medical and Dental Sciences or the European Journal of Chemistry to imitate—and in some cases, literally clone—those of Western academic publishers. But the locations revealed by IP addresses and bank invoices are continents away: Those two journals are published from Pakistan and Turkey, respectively, and both accepted the paper…

“About one-third of the journals targeted in this sting are based in India—overtly or as revealed by the location of editors and bank accounts—making it the world’s largest base for open-access publishing; and among the India-based journals in my sample, 64 accepted the fatally flawed papers and only 15 rejected it.”

So, opportunists in the developing world have seized upon faux-reviewed academic publishing as the way to turn a PC and an Internet connection into profits. Good for them, bad for science. How does one know when Bing or Google links to fake info? Does it matter anymore? I have to think it does. I hope that people in the field, like Bohannon, who care about open access to legitimate research will find a way to counter this flood of bad information. In the meantime, well… don’t believe every link you read.

Cynthia Murrell, October 18, 2013

Sponsored by ArnoldIT.com, developer of Augmentext

Academic Publisher eLife Shifting to Peer Review Model

November 17, 2022

The racket, er, field of academic journalism has needed a shakeup for quite some time. Will this be the move that does it? Science reports, “Journal Seeks to Upend Scientific Publishing by Only Reviewing—Not Accepting—Manuscripts.” The non-profit, online-only eLife hopes the change will offer readers more nuance than the traditional accept-or-reject dichotomy. The free-to-read journal used to charge writers $3000 if it accepted and published their paper. Writer Jeffrey Brainard relates:

“Under the new approach, eLife will charge authors $2000 if they accept the publisher’s offer to have a submitted manuscript undergo peer review. Regardless of whether the critiques are positive or negative, the manuscript and its associated, unsigned peer-review statements will be posted online and be free to read. If the author revises the paper to address the comments, eLife will post the new version.

Since eLife was founded in 2012, it has tried other innovations. In 2020, for example, it started to require all submitted manuscripts be published as preprints. Abandoning the ‘accept’ stamp is a logical next step, says eLife’s editor-in-chief, biologist Michael Eisen of the University of California, Berkeley.

Eisen, who co-founded the open-access Public Library of Science journals in 2003, says the detailed critiques written by reviewers that eLife recruits are its main contribution to the scientific process. The reviews, he says, are ‘more nuanced, more informative, and more useful to the community than our thumbs-up or thumbs down publishing decision.’ He also argues that the new model will speed up a peer-review process that at other journals is often opaque and slow because it can involve multiple rounds.”

The plan is similar to a practice already put into place by open-research platform F1000Research, which allows readers to review manuscripts posted by researchers. Eisen, however, expects to offer higher quality critiques on his site. Some details are still being ironed out, including how to decide which papers to invite for review. The new policy is to be implemented in January 2023. Researchers funded by the NIH will be glad to know they can declare a reviewed manuscript the final version of record, allowing it to be indexed by the PubMed search engine (a funding requirement). Ultimately, says Eisen, the new approach will push the publisher to the background and researchers’ work to the fore. We wonder how other academic journals feel about that philosophy.

Cynthia Murrell, November 17, 2022

Open Review Brings Peer Review to the Scientific Masses

April 7, 2014

This seems like a step in the right direction for the world of academic publishing. ResearchGate News announces, “Peer Review Isn’t Working—Introducing Open Review.” We know that increasingly, papers based on shoddy research have been making it into journals supposedly policed by rigorous peer-review policies. Now, ResearchGate has launched a countermeasure—Open Review brings the review process to the public. The write up happily tells us:

“We’re excited to announce the launch of Open Review today. It’s designed to help you openly voice feedback and evaluate research that you have read and worked with, bringing more transparency to science and speeding up progress.

“With Open Review you can:

*Voice your feedback on the reproducibility of research.

*Request reviews of research you’re interested in.

*Discuss publications with the authors and other experts.

“All too often we’ve seen false findings printed in the pages of noteworthy journals while valuable research doesn’t make the light of day, and rarely is anything done about it. Open Review aims to change this. Recent events have highlighted the need for a new system for peer review, and Professor Kenneth Ka-Ho Lee and his team at the Chinese University of Hong Kong are taking the first steps.”

The piece goes on to discuss Professor Lee’s review, the first to be published under the new system. Lee and company analyzed a study published last January in Nature on a new (and more ethically neutral) method of producing stem cells for researchers. Unfortunately, the study contained egregious errors, and never should have made it into print. Elevated hopes were brought back to earth.

The write-up concludes with a call for input from scientists on how to improve Open Review (ResearchGate membership required to comment). ResearchGate was founded in 2008 to facilitate collaboration by scientists around the world. They emphasize a dedication to transparency; this project certainly embodies that goal.

Cynthia Murrell, April 07, 2014

Sponsored by ArnoldIT.com, developer of Augmentext

Analyzing Science Publishing Costs

October 30, 2013

The science journal Nature examines the changing state of academic journals in, “Open Access: The True Cost of Science Publishing.” Writer Richard Van Noorden goes in-depth on the costs behind publishing research articles, the factors behind those costs, and how open access publishing may turn the whole field on its ear (and whether this is a good thing). Let’s start with some crazy-sounding numbers; the article tells us:

“Data from the consulting firm Outsell in Burlingame, California, suggest that the science-publishing industry generated $9.4 billion in revenue in 2011 and published around 1.8 million English-language articles — an average revenue per article of roughly $5,000. Analysts estimate profit margins at 20–30% for the industry, so the average cost to the publisher of producing an article is likely to be around $3,500–4,000.”

That sure seems like a lot. Traditional publishers say that fans of open access understate the value they add to each article while overstating how much they make on them. It is difficult, though, to examine these claims, since these journals play their financial cards close to the vest. Such secrecy may eventually give way before the wealth of information available about open access options, which Noorden covers thoroughly. More and more researchers will hesitate to take the big names at their word on costs.

It is worth noting one downside to the current proliferation of open access journals: quality control. The traditional journals maintain that their high publishing fees are partially justified by the effort they put into sorting and disqualifying submissions. Both those publishers and open access journals ensure quality through the peer-review process, but recent findings bring doubt to the reliability of this measure at certain, newer publishers. Though the transition to open access journals may appear inevitable to some, the old-school players seem determined to defend their model. Will they succeed?

Cynthia Murrell, October 30, 2013

Sponsored by ArnoldIT.com, developer of Augmentext

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